skip to main content
US FlagAn official website of the United States government
dot gov icon
Official websites use .gov
A .gov website belongs to an official government organization in the United States.
https lock icon
Secure .gov websites use HTTPS
A lock ( lock ) or https:// means you've safely connected to the .gov website. Share sensitive information only on official, secure websites.


Search for: All records

Creators/Authors contains: "Lyons, S"

Note: When clicking on a Digital Object Identifier (DOI) number, you will be taken to an external site maintained by the publisher. Some full text articles may not yet be available without a charge during the embargo (administrative interval).
What is a DOI Number?

Some links on this page may take you to non-federal websites. Their policies may differ from this site.

  1. Abstract A central goal in ecology is investigating the impact of major perturbations, such as invasion, on the structure of biological communities. One promising line of inquiry is using co-occurrence analyses to examine how species’ traits mediate coexistence and how major ecological, climatic, and environmental disturbances can affect this relationship and underlying mechanisms. However, present communities are heavily influenced by anthropogenic behaviors and may exhibit greater or lesser resistance to invasion than communities that existed before human arrival. Therefore, to disentangle the impact of individual disturbances on mammalian communities, it is important to examine community dynamics before humans. Here, we use the North American fossil record to evaluate the co-occurrence structure of mammals across the Great American Biotic Interchange. We compiled 126 paleocommunities from the late Pliocene (4–2.5 Ma) and early Pleistocene (2.5–1 Ma). Genus-level co-occurrence was calculated to identify significantly aggregated (co-occur more than expected) and segregated (co-occur less than expected) genus pairs. A functional diversity analysis was used to calculate functional distance between genus pairs to evaluate the relationship between pair association strength and functional role. We found that the strength distribution of aggregating and segregating genus pairs does not significantly change from the late Pliocene to the early Pleistocene, even with different mammals forming the pairs, including immigrant mammals from South America. However, we did find that significant pairs, both aggregations and segregations, became more similar in their functional roles following the Plio-Pleistocene transition. Due to different mammals and ecological roles forming significant associations and the stability of co-occurrence structure across this interval, our study suggests that mammals have fundamental ways of assembling that may have been altered by humans in the present. 
    more » « less
    Free, publicly-accessible full text available March 11, 2026
  2. ABSTRACT AimThe species that compose local communities possess unique sets of functional and ecological traits that can be used as indicators of biotic and abiotic variation across space and time. Body size is a particularly relevant trait because species with different body sizes typically have different life history strategies and occupy distinct niches. Here we used the body sizes of non‐volant (i.e., non‐flying) terrestrial mammals to quantify and compare the body size disparity of mammal communities across the globe. LocationGlobal. Time PeriodPresent. Major Taxa StudiedNon‐volant terrestrial mammals. MethodsWe used IUCN range maps of 3982 terrestrial mammals to identify 1876 communities. We then combined diet data with data on climate, elevation and anthropogenic pressures to evaluate these variables' relative importance on the observed body size dispersion of these communities and its deviation from a null model. ResultsDispersion for these communities is significantly greater than expected in 54% of communities and significantly less than expected in 30% of communities. The number of very large species, continent, range sizes, diet disparity and annual temperature collectively explain > 50% of the variation in observed dispersion, whereas continent, the number of very large species, and precipitation collectively explain > 30% of the deviation from the null model. Main ConclusionsClimate and elevation have minimal predictive power, suggesting that biotic factors may be more important for explaining community body size distributions. However, continent is consistently a strong predictor of dispersion, likely due to it capturing the combined effects of climate, size‐selective human‐induced extinctions and more. Overall, our results are consistent with several plausible explanations, including, but not limited to, competitive exclusion, unequal distribution of resources, within‐community environmental heterogeneity, habitat filtering and ecosystem engineering. Further work focusing on other confounding variables, at finer spatial scales and/or within more causal frameworks is required to better understand the driver(s) of these patterns. 
    more » « less
    Free, publicly-accessible full text available December 1, 2025
  3. Understanding the roles of habitat filtering, dispersal limitations and biotic interactions in shaping the organization of animal communities is a central research goal in ecology. Attempts to extend these approaches into deep time have the potential to illuminate the role of these processes over key intervals in evolutionary history. The Ediacaran marks one such interval, recording the first macroscopic benthic communities and a stepwise intensification in animal ecosystem engineering. Here, we use taxonomic co-occurrence analysis to evaluate how community structure shifted through the late Ediacaran and the role of different community assembly processes in driving these changes. We find that community structure shifted significantly throughout the Ediacaran, with the most dramatic shift occurring at the White Sea–Nama boundary (approx. 550 Ma) characterized by a split between older, more enigmatic taxonomic groups (the ‘Ediacara-type’ fauna) and more recognizable (‘Cambrian-type’) metazoans. While ecosystem engineering via bioturbation is implicated in this shift, dispersal limitations also played apart in separating biota types. We hypothesize that bioturbation acted as a local habitat filter in the late Ediacaran, selecting against genera adapted to microbial mat ecosystems. Ecosystem engineering regime shifts in the Ediacaran may thus have had a large impact on the development of subsequent metazoan communities. 
    more » « less
    Free, publicly-accessible full text available December 1, 2025
  4. Mammals influence nearly all aspects of energy flow and habitat structure in modern terrestrial ecosystems. However, anthropogenic effects have probably altered mammalian community structure, raising the question of how past perturbations have done so. We used functional diversity (FD) to describe how the structure of North American mammal palaeocommunities changed over the past 66 Ma, an interval spanning the radiation following the K/Pg and several subsequent environmental disruptions including the Palaeocene–Eocene Thermal Maximum (PETM), the expansion of grassland, and the onset of Pleistocene glaciation. For 264 fossil communities, we examined three aspects of ecological function: functional evenness, functional richness and functional divergence. We found that shifts in FD were associated with major ecological and environmental transitions. All three measures of FD increased immediately following the extinction of the non-avian dinosaurs, suggesting that high degrees of ecological disturbance can lead to synchronous responses both locally and continentally. Otherwise, the components of FD were decoupled and responded differently to environmental changes over the last ~56 Myr. 
    more » « less
  5. Abstract Massive stars are a major source of chemical elements in the cosmos, ejecting freshly produced nuclei through winds and core-collapse supernova explosions into the interstellar medium. Among the material ejected, long-lived radioisotopes, such as60Fe (iron) and26Al (aluminum), offer unique signs of active nucleosynthesis in our galaxy. There is a long-standing discrepancy between the observed60Fe/26Al ratio by γ-ray telescopes and predictions from supernova models. This discrepancy has been attributed to uncertainties in the nuclear reaction networks producing60Fe, and one reaction in particular, the neutron-capture on59Fe. Here we present experimental results that provide a strong constraint on this reaction. We use these results to show that the production of60Fe in massive stars is higher than previously thought, further increasing the discrepancy between observed and predicted60Fe/26Al ratios. The persisting discrepancy can therefore not be attributed to nuclear uncertainties, and points to issues in massive-star models. 
    more » « less
    Free, publicly-accessible full text available December 1, 2025
  6. Improving nuclear data for short-lived fission product yields will further our fundamental understanding of fission, which is needed across various scientific fields and applications. One method of attaining the needed product yield data is through cyclic neutron activation, which allows a target to be irradiated in a neutron environment and then transported for counting of the radionuclides produced, typically via g spectroscopy. Recently, such a system was constructed and commissioned at Pacific Northwest National Laboratory. In this system, targets are shuttled between the head of a D-T neutron generator and a counting station with a transit time of about 2 sec. As part of the characterization of this system, the neutron flux was studied using two activation targets. The neutron flux from the deuterium-tritium fusion generator was determined to be 9:95±0:33×108 n/cm2·s with a peak energy of 14.9 MeV and a spread of approximately 4 decades between the epithermal and 14 MeV peak group flux. 
    more » « less
  7. The significant extinctions in Earth history have largely been unpredictable in terms of what species perish and what traits make species susceptible. The extinctions occurring during the late Pleistocene are unusual in this regard, because they were strongly size-selective and targeted exclusively large-bodied animals (i.e., megafauna, >1 ton) and disproportionately, large-bodied herbivores. Because these animals are also at particular risk today, the aftermath of the late Pleistocene extinctions can provide insights into how the loss or decline of contemporary large-bodied animals may influence ecosystems. Here, we review the ecological consequences of the late Pleistocene extinctions on major aspects of the environment, on communities and ecosystems, as well as on the diet, distribution and behavior of surviving mammals. We find the consequences of the loss of megafauna were pervasive and left legacies detectable in all parts of the Earth system. Furthermore, we find that the ecological roles that extinct and modern megafauna play in the Earth system are not replicated by smaller-bodied animals. Our review highlights the important perspectives that paleoecology can provide for modern conservation efforts. 
    more » « less